M o l T a l k

PDBChainSaw

Documentation

Part ii

For managing the relation model of PDB files we use PostgreSQL. PDBChainSaw extracts commonly used information from PDB files and enters them into tables chsaw_pdb and chsaw_chain.

PDBChainSaw Database Schema

The two tables are connected through the foreign key (chsaw_pdb.code = chsaw_chain.pdb).

The creation commands in SQL for the tables: chsaw_pdb.txt and chsaw_chain.txt

To create the tables issue the following commands within the PostgreSQL shell (psql):
\i chsaw_pdb.txt
\i chsaw_chain.txt

continue with the installation of the cronjob: Part iii

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